Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912025.1_cds_XP_016462049.1_55315
CDS Infomation

[gene=LOC107785291] [db_xref=GeneID:107785291] [protein=phosphoinositide phospholipase C 2-like isoform X2] [protein_id=XP_016462049.1] [location=complement(join(112563..112856,113068..113154,113260..113412,114097..114214,114721..114944,115046..115216,115291..115426,117910..118106,118708..119010))] [gbkey=CDS]
Sequence

ATGTCGAAACAGACGTACAAAGTCGGTTTCTTTTTCCGTCGGCAGTTTACAATGACCGCC
GCCGAGGCTCCGGCGGACGTGAAGAACACATTCAACCATTATTCCGACGGTGCCAGAGTC
ATGAACGCCGACAACTTTCATCGGTTCTTAATTGAAGTTCAGAAGGAGAAAAATGTAACC
TTAGACGACGCTCAGGCGATAATCAATAAGCACGGCGACCCTAAGCACACAGGCCTCCAG
CTCGATGCTTTCTTCAAGTATCTCTTTTCTGATATTAATCCTCCTCTCGATCCTAAACTC
GGGATTCACCATGATATGACTGCACCTTTGTCTCATTACTACATATACACAGGCCATAAT
TCTTATCTAACTGGGAATCAACTGAGTAGTGATTGCAGTGATGTCCCCATAATACAAGCT
CTACAGAGAGGTGTCAGAGTAATTGAATTGGATATTTGGCCAAATTCAGATGAAGATGAT
GTAGAGGTTTTACATGGAAGGACACTGACCACTCCAGTGGCACTCATCAAATGCTTGAGG
TCTATTAAGGAGCATGCTTTTTCTGCTTCTGAGTATCCTGTTGTAATAACACTTGAAGAT
CATCTAACTCCAGATCTTCAGGCAAAAGTAGCTGAGATGATCACTCAAACATTTGGAGAC
ATGCTGTTTTCTCCTTCAGAGTGTTTGAAGGAACTTCCTTCTCCAGAATCACTGAAAAAA
CGTATTATGATATCAACTAAGCCACCGAAAGAATACTTACAAGCCAAGGAAGTCAAGGAA
AAAGATGCCTCAAAGAAAGGAGCGGAGGATGATTCTGATGAAGGAGAAGATGATGAAGAT
GATGAAGGAGATCCAAAGTCAGAGAAGAATGTAGCTTCAGAATACAAGCGTTTAATTGCC
ATTCATGCTGGAAAGGGGAAAGGAGGACTATCTGATTGGCTGAGGGTTGACCCCAACAAC
GTAAGACGGCTTAGTCTCAGTGAACCAGCACTTGAAAAGGCTGTAGATACTCATAGCAAA
GAGATTATCAGGTTCACGCAGAAAAATTTGCTGAGAGTATACCCAAAGGGAATACGTGTT
GACTCGTCCAATTATGATCCTTTTGTTGGGTGGACGCATGGAGCTCAAATGGTAGCATTT
AATATGCAGGGTTATGGAAGATCACTTTGGTTGATGCATGGTATGTTCAGGGCTAATGGT
GGCTGTGGATATGTTAAGAAACCTGATTTACTATTGACAGCTGGTCCCAACAATGAGGTC
TTCGATCCTACAAAAAAACTGCCTGTCAAAACTACACTAAAGGTGACTGTATATATGGGT
GATGGGTGGGACAAGGACTTTGATCAGACACACTTTGATACGTATTCACCTCCAGATTTC
TATGCAAAGGTAGGAATTGCTGGAGTTCCTGCTGATGCCATAAAGAAGAAAACAAAGACA
ATGGACGACAATTGGATACCAACCTGGGATGAACAGTTTGAATTTCCACTAACAGTACCT
GAATTGGCTCTACTTCGCATTAAAGTTCTTGATTATAATAGGTCCGACAAGGATGAGTTC
GCTGGGCAAACATGTCTACCTGTGCCAGAGCTGCGACAAGGTATCCGAGCAGTCCCACTC
TTCGATCGGAAGGGAGAGAAGTACAGTTCTGTGAAGCTTTTCATGCGTTTCGAATTTATT
TAA

Peptide Sequence

PEP ID

XP_016462049.1
PEP Infomation

PREDICTED: phosphoinositide phospholipase C 2-like isoform X2 [Nicotiana tabacum]
Sequence

MSKQTYKVGFFFRRQFTMTAAEAPADVKNTFNHYSDGARVMNADNFHRFLIEVQKEKNVT
LDDAQAIINKHGDPKHTGLQLDAFFKYLFSDINPPLDPKLGIHHDMTAPLSHYYIYTGHN
SYLTGNQLSSDCSDVPIIQALQRGVRVIELDIWPNSDEDDVEVLHGRTLTTPVALIKCLR
SIKEHAFSASEYPVVITLEDHLTPDLQAKVAEMITQTFGDMLFSPSECLKELPSPESLKK
RIMISTKPPKEYLQAKEVKEKDASKKGAEDDSDEGEDDEDDEGDPKSEKNVASEYKRLIA
IHAGKGKGGLSDWLRVDPNNVRRLSLSEPALEKAVDTHSKEIIRFTQKNLLRVYPKGIRV
DSSNYDPFVGWTHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPDLLLTAGPNNEV
FDPTKKLPVKTTLKVTVYMGDGWDKDFDQTHFDTYSPPDFYAKVGIAGVPADAIKKKTKT
MDDNWIPTWDEQFEFPLTVPELALLRIKVLDYNRSDKDEFAGQTCLPVPELRQGIRAVPL
FDRKGEKYSSVKLFMRFEFI

Transcript Sequence

Gene sequence data has not been registered.